Inversion of Ultrafast X-ray Scattering with Dynamics Constraints

Abstract

Studying molecular transformations on an ultrafast time-scale is vital for understanding chemical reactivity, but interpreting the relevant experiments is challenging because chemical dynamics need to be inferred from an indirect and often incomplete sequence of observations. We propose a method that uses a form of variational recurrent neural network to tackle the problem of inversion of time-resolved X-ray scattering from molecules recorded on a detector. By training our model with molecular trajectories, dynamic correlations and constraints associated with molecular motion can be learned. We show this leads to a more accurate inversion from a detector signal to atom-atom distances, compared to the traditional frame-by-frame approach